PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Sevir.3G197600.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria
Family bZIP
Protein Properties Length: 229aa    MW: 24595.4 Da    PI: 4.8913
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Sevir.3G197600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1322.6e-1079121850
                         HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                         r+   NR+A r++R++Kka  + Lee+vk+L a N++L  +++
  Sevir.3G197600.1.p  79 RKPLGNRVAVRKYREKKKAHAAFLEEEVKKLRAANQQLLRRVQ 121
                         66677*********************************98776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.9E-1571140No hitNo description
SMARTSM003383.9E-1172139IPR004827Basic-leucine zipper domain
PfamPF077161.6E-1373121IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.55474140IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.31E-778122No hitNo description
CDDcd146861.06E-1179130No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    Send to blast
MDDGADLPCQ LLFSHPEVPD SFDELLNSAT TTCTHTHSCN PPGPSAPMHT HTCLHTHTQV  60
LAGGADDDDA REDDPAKPRK PLGNRVAVRK YREKKKAHAA FLEEEVKKLR AANQQLLRRV  120
QDHAVLEAEV VRLRTLLLDV RGKIDAEVGA FPFQNPCSVG SVVSADPALC FNGNSEVAGA  180
WEESSVPSAA DCRIDEGGGM SRETDVPEGL HHPMDVVASF VSSDSLAE*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004961638.11e-168PREDICTED: uncharacterized protein LOC101767291
SwissprotQ8GTS22e-51BZP23_ARATH; Basic leucine zipper 23
TrEMBLB4G1L81e-123B4G1L8_MAIZE; Uncharacterized protein
STRINGGRMZM2G175870_P011e-123(Zea mays)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38313675
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16770.18e-31bZIP family protein